BRAF, Ligand production of epiregulin and amphiregulin, the other RAS genes (NRAS and HRAS) have also been proposed as potential predictive markers, but have not been validated. It should be noted that it is much easier to define whether a mutation is present (or not) in a gene than to standardise the

methodology for measurement of over expression or amplification. Wild-type KRAS is an imperfect biomarker, because only 30-50% of such patients respond to cetuximab, or achieve any improvement in PFS or OS, but some (97,140) have found no correlation between wild-type Kras status and tumour pathological complete response in CRT trials. BRAF BRAF mutations are mutually exclusive to KRAS mutations and are found rarely in Inhibitors,research,lifescience,medical colonic carcinomas (approximately 10%), and may be even less frequent in rectal cancer (140), but few studies distinguish between rectal and colon cancer. The majority of the BRAF mutations are located at codon 600 with a conversion of valine to glutamic acid (V600E). There are no effective Inhibitors,research,lifescience,medical drugs available for the specific and direct inhibition of KRAS. Several agents designed to inhibit the kinase activity Inhibitors,research,lifescience,medical of BRAF have been explored in melanoma, but have not been effective in CRC studies. There are suggestions that Wild-type BRAF is required for response to panitumumab or cetuximab in metastatic colorectal cancer (140). The

treatment of patients with BRAF-mutated tumors using cetuximab/panitumumab in combination with a BRAF-inhibitor, are both possible and logical, but this strategy has not been used. PI3K In patients in the Dutch Inhibitors,research,lifescience,medical TME trial (141), DNA mutations in PIK3CA, KRAS, and BRAF were investigated in 240 stage I to III rectal tumors obtained from non irradiated patients. PIK3CA mutations at exons 9 and 20 were found in 19 (7.9%)

rectal tumors, with 12 cases in exon 9 (5%) and 7 Inhibitors,research,lifescience,medical cases in exon 20 (2.9%); in 81 (33.8%) in exon 1 rectal tumors. BRAF V600E mutation was identified in 5 (2.1%) cases. PIK3CA mutations independently prediced local recurrences (hazard ratio, 3.4; 95% confidence LY2157299 datasheet interval, 1.2-9.2; P=0.017), next to tumor-node-metastasis stage. PIK3CA mutations could be predictive with regard to SCPRT benefit below (142). PIK3CA mutation in exons 9 and 20 was analyzed on 30 tumor samples out of all 32 patients who developed a LR in the irradiated arm of the Dutch TME study. In contrast to previous incidence of 20.8% (5/24) PIK3CA mutations in the nonirradiated patients (141), investigators identified only 6.7% (2/30) mutations in the irradiated patients experiencing local recurrence. The interaction odds ratio (OR) of 0.3 although not significant because of small numbers, does suggest a relative benefit from SCPRT among carriers of the PIK3CA mutation compared with non-carriers. Although others suggest the mutation may only represent 4% of patients with rectal cancer (143).