acidilactici 3 0 W. confusa 5 4 1 Ped. pentosaceus 3 1 2 KAN Lb. plantarum 10 0 Leuc pseudomesenteroides Everolimus chemical structure 1 0 Lb. ghanensis 1
0 Lb. fermentum 2 0 Lb. salivarius 6 0 Ped. acidilactici 3 0 W. confusa 5 3 W. confusa 5 3 Ped. pentosaceus 3 0 STREP Lb. plantarum 10 2 5 Leuc. pseudomesenteroides 1 1 Lb. ghanensis 1 1 Lb. fermentum 2 2 Lb. salivarius 6 4 2 Ped. acidilactici 3 0 W. confusa 5 2 3 Ped. pentosaceus 3 0 TET Lb. plantarum 10 2 8 Leuc. pseudomesenteroides 1 1 Lb. ghanensis 1 1 Lb. fermentum 2 2 Lb. salivarius 6 6 Ped. acidilactici 3 1 2 W. confusa 5 4 1
Ped. pentosaceus 3 2 1 VAN Lb. plantarum 10 0 Leuc. pseudomesenteroides 1 0 Lb. ghanensis 1 0 Lb. fermentum 2 0 Lb. salivarius 6 0 Ped. acidilactici 3 0 W. confusa 5 0 Ped. pentosaceus 3 0 www.selleckchem.com/products/lgk-974.html Abbreviations: AMP, Ampicillin; CHL, Chloramphenicol; CLIN, Clindamycin; ERY, Erythromycin; GEN, Gentamicin; KAN, Kanamycin; STREP, Streptomycin; TET,
Tetracycline; VAN, Vancomycin. n; number of strains within each species tested. MIC range tested indicated in gray. Haemolysis testing After streaking the bacteria on tryptone soy agar with sheep blood, no β-haemolysis was observed Rebamipide in any of the bacteria strains. However, as shown in Figure 4, α-haemolysis was observed in 9 out of the 33 strains of which 6 strains were Lb. salivarius, 2 strains W. confusa and the Lb. delbrueckii species strain. Figure 4 Presence of α-haemolytic activity (appearance of greenish zones around the colonies) in Lb. salivarius FK11-4. No haemolytic activities in strain W. cibaria SK9-7. No β-haemolysis (clear zone around colonies of bacteria) was observed in any of the strains. Discussion The reproducibility and discriminatory power of rep-PCR (GTG)5 in typing at species and subspecies level have previously been reported [8, 43–45] and also in the present study the technique proved useful for genotypic fingerprinting and grouping. Lb. plantarum, Lb. paraplantarum and Lb. pentosus share very similar 16S rRNA gene sequences; ≥ 99% and also have similar phenotypic traits making it difficult to differentiate these three species [38]. The recA gene sequence was therefore considered a reliable and useful target in order to differentiate Lb. plantarum, Lb. pentosus and Lb. paraplantarum species [38].